Hi runnerdude. I'm not the same foot-type as you, as I have a normal arch and am a moderate overpronator. But the only pair of shoes that I have ran in where I could feel the arch area of the shoes against the arch of my foot, caused me a lot of pain in the arches when running, and I ended up returning them to the store. So in my experience, you shouldn't feel the arch area of the shoe pressing into your arch.
Hope this helps, and good luck finding a pair of shoes that suits you!
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